No, but you can use the twinfire on a single coil setup as well. It shows you how to wire it in to all different types of setups. Basicly on that you would keep your factory ignitor or ditch it. You can do it either way with the EMS. You would have to run the new 540v feed to the coil and then back to the box. Then the #1 trigger wire for the AEM to either the wire on the ignitor that the coil would be grounding through or straight to the white coil trigger on the EMS and then set all your settings accordingly. The AEM twinfire can be set up multiple different ways. It just has up to 4 channels. You could set it up to run two twin ouput coils and do a waste spark setup, You can do wastespark setup on individual coils. It has a ton of options.
Its a great box and like I said, get their latest one and you shouldnt have any trouble with it. I would buy it directly from AEM though not anyone else selling them because you never know if its the latest one or not.