I'm going to start this with a disclaimer. Please do not take this as an attack, as I mean it in no such way.
From what I've gathered you take numbers spouted off by others, and publications at face value, then apply your "rule" to it, since that has what has proven to be true in your experience. I can tell you from MY experience, which is alot of real world data, that you are uninformed at best. And it seems that BenFenner has a clue as to whats up as well. If you are willing to BLINDLY follow what someone on another forum preaches to you, how and why are you challenging everything that is told to you by other people with tons of experience. I'm no bench racer, and I have alot of experience telling me otherwise as far as your theory.
There is absolutely NO way that any engine putting down EXACTLY 1000 chp will put down 960 to the wheels. Unless the wrong correction factors were used on top of using something like a dynojet. But given your seemingly limited experiece you never thought of varying factors, such as correction values, the type of dyno used, the intended capacities of that dyno. On top of that EVERY dyno will read differently. If you don't use the SAME dyno with the SAME correction factors plugged in, similar weather for before and after tuning, you are nothing more than a dyno queen racer, like the Supra guys. Chasing a number.
The numbers published in magazines and other literature are that, just numbers. Something to throw out to give you an idea. That goes for manufacturer numbers as well. Take them with a large grain of salt. False claims, and exaggerations lead to numbers that are nothing more than a ball park figure. (remember when the RX8 came out, and they actually would buy back the car if not satisfied with performance b/c of false power claims??? It was rated at like 250 or so, but never saw above 160 to the wheels.) This goes for magazines, builders, etc.... Take what you hear with a grain of salt, not at face value that IT MUST BE what they claim. Unless you know the person in question, and their abilities there is a chance that they may not be fully capable of operating the equipment correctly, which will lead to skewed results.
Go out and get a lot more REAL experience. Stop taking everything you read and see for %100 truth. I know that you do have some experience, and I see by your sig you've done some things. I may not have the level of build you do, but I have a lot of tuning experience, and dyno time (all types of chassis, and engine dynos). I've had a large part building numerous bad ass engines, the most notable was a 2005 Engine Masters Challenge motor. Because of throwing the harmonic balancer we had to run it in the competition with no tuning. Our tuning time was spent replacing the balancer instead of re jetting the carb. Google it. I've since had a falling out with a few of the guys and wont post it. The owner's son that started the project got his nose in some dope, and another guy had a social interaction problem. I still talk to a few of the guys, and still work with them and others on some other projects. One of which should be protoyped in the next year will BLOW your mind
Please do not take this as any type of attack. I am sure you are capable, just with limited resources. Get friendly with some people that are really smart, and have access to equipment. You'll look back and wonder what took you so long.